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RE: cdo grib-api support ยป config_2.log

Palina Lapo, 2016-01-27 10:04

 
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.

It was created by cdo configure 1.7.0, which was
generated by GNU Autoconf 2.68. Invocation command line was

$ ./configure --with-netcdf=/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib --with-hdf5=/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib --with-grib_api=/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API

## --------- ##
## Platform. ##
## --------- ##

hostname = service
uname -m = x86_64
uname -r = 2.6.32-504.el6.x86_64
uname -s = Linux
uname -v = #1 SMP Wed Oct 15 04:27:16 UTC 2014

/usr/bin/uname -p = unknown
/bin/uname -X = unknown

/bin/arch = x86_64
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = unknown
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown

PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/JPEG/jpeg-6b/bin
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/bin
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/GSL/bin
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/FREETYPE/bin
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/HDF4/hdf-4.2.11-linux-centos6-x86_64-gcc447/bin
PATH: /usr/local/bin
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/NCL/bin
PATH: /RHMC/soft/netcdf/bin
PATH: /opt/intel/composer_xe_2011_sp1.6.233/bin/intel64
PATH: /opt/intel/impi/4.0.3/intel64/bin
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/JPEG/jpeg-6b/bin
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/bin
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/GSL/bin
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/FREETYPE/bin
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/HDF4/hdf-4.2.11-linux-centos6-x86_64-gcc447/bin
PATH: /usr/local/bin
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/NCL/bin
PATH: /RHMC/soft/netcdf/bin
PATH: /opt/intel/composer_xe_2011_sp1.6.233/bin/intel64
PATH: /opt/intel/impi/4.0.3/intel64/bin
PATH: /usr/lib64/qt-3.3/bin
PATH: /usr/local/bin
PATH: /bin
PATH: /usr/bin
PATH: /usr/local/sbin
PATH: /usr/sbin
PATH: /sbin
PATH: /opt/ibutils/bin
PATH: /usr/sbin
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/soft/java/jdk1.8.0_65/bin
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/soft/java/jdk1.8.0_65/jre/bin
PATH: /RHMC/users/models/wrf/bin
PATH: /usr/sbin
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/soft/java/jdk1.8.0_65/bin
PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/soft/java/jdk1.8.0_65/jre/bin


## ----------- ##
## Core tests. ##
## ----------- ##

configure:2605: checking build system type
configure:2619: result: x86_64-unknown-linux-gnu
configure:2639: checking host system type
configure:2652: result: x86_64-unknown-linux-gnu
configure:2691: checking for a BSD-compatible install
configure:2759: result: /usr/bin/install -c
configure:2770: checking whether build environment is sane
configure:2825: result: yes
configure:2976: checking for a thread-safe mkdir -p
configure:3015: result: /bin/mkdir -p
configure:3022: checking for gawk
configure:3038: found /bin/gawk
configure:3049: result: gawk
configure:3060: checking whether make sets $(MAKE)
configure:3082: result: yes
configure:3111: checking whether make supports nested variables
configure:3128: result: yes
configure:3256: checking whether to enable maintainer-specific portions of Makefiles
configure:3265: result: no
configure:3292: checking for style of include used by make
configure:3320: result: GNU
configure:3391: checking for gcc
configure:3407: found /usr/bin/gcc
configure:3418: result: gcc
configure:3647: checking for C compiler version
configure:3656: gcc --version >&5
gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11)
Copyright (C) 2010 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:3667: $? = 0
configure:3656: gcc -v >&5
Using built-in specs.
Target: x86_64-redhat-linux
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux
Thread model: posix
gcc version 4.4.7 20120313 (Red Hat 4.4.7-11) (GCC)
configure:3667: $? = 0
configure:3656: gcc -V >&5
gcc: '-V' option must have argument
configure:3667: $? = 1
configure:3656: gcc -qversion >&5
gcc: unrecognized option '-qversion'
gcc: no input files
configure:3667: $? = 1
configure:3687: checking whether the C compiler works
configure:3709: gcc -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib -lopenjpeg -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.1rc1/libcdi/lib conftest.c >&5
/usr/bin/ld: cannot find -lopenjpeg
collect2: ld returned 1 exit status
configure:3713: $? = 1
configure:3751: result: no
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "cdo"
| #define PACKAGE_TARNAME "cdo"
| #define PACKAGE_VERSION "1.7.0"
| #define PACKAGE_STRING "cdo 1.7.0"
| #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
| #define PACKAGE_URL ""
| #define CDO "1.7.0"
| #define PACKAGE "cdo"
| #define VERSION "1.7.0"
| /* end confdefs.h. */
|
| int
| main ()
| {
|
| ;
| return 0;
| }
configure:3756: error: in `/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0':
configure:3758: error: C compiler cannot create executables
See `config.log' for more details

## ---------------- ##
## Cache variables. ##
## ---------------- ##

ac_cv_build=x86_64-unknown-linux-gnu
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=
ac_cv_env_CXXFLAGS_value=
ac_cv_env_CXX_set=
ac_cv_env_CXX_value=
ac_cv_env_LDFLAGS_set=set
ac_cv_env_LDFLAGS_value='-L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib -lopenjpeg -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.1rc1/libcdi/lib'
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_host=x86_64-unknown-linux-gnu
ac_cv_path_install='/usr/bin/install -c'
ac_cv_path_mkdir=/bin/mkdir
ac_cv_prog_AWK=gawk
ac_cv_prog_ac_ct_CC=gcc
ac_cv_prog_make_make_set=yes
am_cv_make_support_nested_variables=yes

## ----------------- ##
## Output variables. ##
## ----------------- ##

ACLOCAL='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/missing aclocal-1.14'
AMDEPBACKSLASH='\'
AMDEP_FALSE='#'
AMDEP_TRUE=''
AMTAR='$${TAR-tar}'
AM_BACKSLASH='\'
AM_CPPFLAGS=''
AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)'
AM_DEFAULT_VERBOSITY='1'
AM_V='$(V)'
AR=''
AS=''
AUTOCONF='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/missing autoconf'
AUTOHEADER='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/missing autoheader'
AUTOMAKE='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/missing automake-1.14'
AWK='gawk'
BUILD_AVX2_TESTS_FALSE=''
BUILD_AVX2_TESTS_TRUE=''
BUILD_AVX_TESTS_FALSE=''
BUILD_AVX_TESTS_TRUE=''
BUILD_SSE42_TESTS_FALSE=''
BUILD_SSE42_TESTS_TRUE=''
CC='gcc'
CCDEPMODE=''
CFLAGS=''
CLDFLAGS=''
CLIBS=''
CMOR_LIBS=''
CPP=''
CPPFLAGS=''
CURL_INCLUDE=''
CURL_LDFLAGS=''
CXX=''
CXXCPP=''
CXXDEPMODE=''
CXXFLAGS=''
CYGPATH_W='echo'
DEFS=''
DEPDIR='.deps'
DLLTOOL=''
DSYMUTIL=''
DUMPBIN=''
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP=''
ENABLE_ALL_STATIC_FALSE=''
ENABLE_ALL_STATIC_TRUE=''
ENABLE_CDI_LIB=''
ENABLE_CDI_LIB_FALSE=''
ENABLE_CDI_LIB_TRUE=''
ENABLE_CGRIBEX=''
ENABLE_DATA=''
ENABLE_EXTRA=''
ENABLE_GRIB=''
ENABLE_GRIBAPI=''
ENABLE_IEG=''
ENABLE_MAGICS_FALSE=''
ENABLE_MAGICS_TRUE=''
ENABLE_NC2=''
ENABLE_NC4=''
ENABLE_NC4HDF5=''
ENABLE_NETCDF=''
ENABLE_SERVICE=''
EXEEXT=''
FCFLAGS=''
FGREP=''
GREP=''
GRIB_API_INCLUDE=''
GRIB_API_LIBS=''
HDF5_INCLUDE=''
HDF5_LIBS=''
HDF5_ROOT=''
HOST_NAME=''
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
LD=''
LDFLAGS='-L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib -lopenjpeg -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.1rc1/libcdi/lib'
LIBOBJS=''
LIBS=''
LIBTOOL=''
LIPO=''
LN_S=''
LTLIBOBJS=''
MAGICS_INCLUDE=''
MAGICS_LIBS=''
MAGICS_ROOT=''
MAINT='#'
MAINTAINER_MODE_FALSE=''
MAINTAINER_MODE_TRUE='#'
MAKEINFO='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/missing makeinfo'
MANIFEST_TOOL=''
MKDIR_P='/bin/mkdir -p'
NC_CONFIG=''
NETCDF_INCLUDE=''
NETCDF_LIBS=''
NETCDF_ROOT=''
NM=''
NMEDIT=''
OBJDUMP=''
OBJEXT=''
OPENMP_CFLAGS=''
OTOOL64=''
OTOOL=''
PACKAGE='cdo'
PACKAGE_BUGREPORT='http://mpimet.mpg.de/cdo'
PACKAGE_NAME='cdo'
PACKAGE_STRING='cdo 1.7.0'
PACKAGE_TARNAME='cdo'
PACKAGE_URL=''
PACKAGE_VERSION='1.7.0'
PATH_SEPARATOR=':'
PROJ_INCLUDE=''
PROJ_LDFLAGS=''
PTHREAD_CC=''
PTHREAD_CFLAGS=''
PTHREAD_LIBS=''
RANLIB=''
SED=''
SET_MAKE=''
SHELL='/bin/sh'
STRIP=''
SYSTEM_TYPE=''
SZLIB_INCLUDE=''
SZLIB_LIBS=''
THREADS_INCLUDE=''
THREADS_LIBS=''
UDUNITS_INCLUDE=''
UDUNITS_LDFLAGS=''
USER_NAME=''
VERSION='1.7.0'
XML2_LIBS=''
ZLIB_INCLUDE=''
ZLIB_LIBS=''
ac_ct_AR=''
ac_ct_CC='gcc'
ac_ct_CXX=''
ac_ct_DUMPBIN=''
am__EXEEXT_FALSE=''
am__EXEEXT_TRUE=''
am__fastdepCC_FALSE=''
am__fastdepCC_TRUE=''
am__fastdepCXX_FALSE=''
am__fastdepCXX_TRUE=''
am__include='include'
am__isrc=''
am__leading_dot='.'
am__nodep='_no'
am__quote=''
am__tar='$${TAR-tar} chof - "$$tardir"'
am__untar='$${TAR-tar} xf -'
ax_pthread_config=''
bindir='${exec_prefix}/bin'
build='x86_64-unknown-linux-gnu'
build_alias=''
build_cpu='x86_64'
build_os='linux-gnu'
build_vendor='unknown'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='NONE'
host='x86_64-unknown-linux-gnu'
host_alias=''
host_cpu='x86_64'
host_os='linux-gnu'
host_vendor='unknown'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
install_sh='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mkdir_p='$(MKDIR_P)'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='NONE'
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
subdirs=''
sysconfdir='${prefix}/etc'
target_alias=''

## ----------- ##
## confdefs.h. ##
## ----------- ##

/* confdefs.h */
#define PACKAGE_NAME "cdo"
#define PACKAGE_TARNAME "cdo"
#define PACKAGE_VERSION "1.7.0"
#define PACKAGE_STRING "cdo 1.7.0"
#define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo"
#define PACKAGE_URL ""
#define CDO "1.7.0"
#define PACKAGE "cdo"
#define VERSION "1.7.0"

configure: exit 77
    (1-1/1)