This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by cdo configure 1.7.0, which was generated by GNU Autoconf 2.68. Invocation command line was $ ./configure --with-netcdf=/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib --with-hdf5=/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib --with-grib_api=/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API ## --------- ## ## Platform. ## ## --------- ## hostname = service uname -m = x86_64 uname -r = 2.6.32-504.el6.x86_64 uname -s = Linux uname -v = #1 SMP Wed Oct 15 04:27:16 UTC 2014 /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/JPEG/jpeg-6b/bin PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/bin PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/GSL/bin PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/FREETYPE/bin PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/HDF4/hdf-4.2.11-linux-centos6-x86_64-gcc447/bin PATH: /usr/local/bin PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/NCL/bin PATH: /RHMC/soft/netcdf/bin PATH: /opt/intel/composer_xe_2011_sp1.6.233/bin/intel64 PATH: /opt/intel/impi/4.0.3/intel64/bin PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/JPEG/jpeg-6b/bin PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/bin PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/GSL/bin PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/FREETYPE/bin PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/HDF4/hdf-4.2.11-linux-centos6-x86_64-gcc447/bin PATH: /usr/local/bin PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/NCL/bin PATH: /RHMC/soft/netcdf/bin PATH: /opt/intel/composer_xe_2011_sp1.6.233/bin/intel64 PATH: /opt/intel/impi/4.0.3/intel64/bin PATH: /usr/lib64/qt-3.3/bin PATH: /usr/local/bin PATH: /bin PATH: /usr/bin PATH: /usr/local/sbin PATH: /usr/sbin PATH: /sbin PATH: /opt/ibutils/bin PATH: /usr/sbin PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/soft/java/jdk1.8.0_65/bin PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/soft/java/jdk1.8.0_65/jre/bin PATH: /RHMC/users/models/wrf/bin PATH: /usr/sbin PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/soft/java/jdk1.8.0_65/bin PATH: /data/RHMC/users/models/wrf/WRFV3.7/data/soft/java/jdk1.8.0_65/jre/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:2605: checking build system type configure:2619: result: x86_64-unknown-linux-gnu configure:2639: checking host system type configure:2652: result: x86_64-unknown-linux-gnu configure:2691: checking for a BSD-compatible install configure:2759: result: /usr/bin/install -c configure:2770: checking whether build environment is sane configure:2825: result: yes configure:2976: checking for a thread-safe mkdir -p configure:3015: result: /bin/mkdir -p configure:3022: checking for gawk configure:3038: found /bin/gawk configure:3049: result: gawk configure:3060: checking whether make sets $(MAKE) configure:3082: result: yes configure:3111: checking whether make supports nested variables configure:3128: result: yes configure:3256: checking whether to enable maintainer-specific portions of Makefiles configure:3265: result: no configure:3292: checking for style of include used by make configure:3320: result: GNU configure:3391: checking for gcc configure:3407: found /usr/bin/gcc configure:3418: result: gcc configure:3647: checking for C compiler version configure:3656: gcc --version >&5 gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11) Copyright (C) 2010 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:3667: $? = 0 configure:3656: gcc -v >&5 Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux Thread model: posix gcc version 4.4.7 20120313 (Red Hat 4.4.7-11) (GCC) configure:3667: $? = 0 configure:3656: gcc -V >&5 gcc: '-V' option must have argument configure:3667: $? = 1 configure:3656: gcc -qversion >&5 gcc: unrecognized option '-qversion' gcc: no input files configure:3667: $? = 1 configure:3687: checking whether the C compiler works configure:3709: gcc -L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib -lopenjpeg -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.1rc1/libcdi/lib conftest.c >&5 /usr/bin/ld: cannot find -lopenjpeg collect2: ld returned 1 exit status configure:3713: $? = 1 configure:3751: result: no configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cdo" | #define PACKAGE_TARNAME "cdo" | #define PACKAGE_VERSION "1.7.0" | #define PACKAGE_STRING "cdo 1.7.0" | #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo" | #define PACKAGE_URL "" | #define CDO "1.7.0" | #define PACKAGE "cdo" | #define VERSION "1.7.0" | /* end confdefs.h. */ | | int | main () | { | | ; | return 0; | } configure:3756: error: in `/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0': configure:3758: error: C compiler cannot create executables See `config.log' for more details ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-unknown-linux-gnu ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value='-L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib -lopenjpeg -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.1rc1/libcdi/lib' ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_host=x86_64-unknown-linux-gnu ac_cv_path_install='/usr/bin/install -c' ac_cv_path_mkdir=/bin/mkdir ac_cv_prog_AWK=gawk ac_cv_prog_ac_ct_CC=gcc ac_cv_prog_make_make_set=yes am_cv_make_support_nested_variables=yes ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/missing aclocal-1.14' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_CPPFLAGS='' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='1' AM_V='$(V)' AR='' AS='' AUTOCONF='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/missing autoconf' AUTOHEADER='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/missing autoheader' AUTOMAKE='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/missing automake-1.14' AWK='gawk' BUILD_AVX2_TESTS_FALSE='' BUILD_AVX2_TESTS_TRUE='' BUILD_AVX_TESTS_FALSE='' BUILD_AVX_TESTS_TRUE='' BUILD_SSE42_TESTS_FALSE='' BUILD_SSE42_TESTS_TRUE='' CC='gcc' CCDEPMODE='' CFLAGS='' CLDFLAGS='' CLIBS='' CMOR_LIBS='' CPP='' CPPFLAGS='' CURL_INCLUDE='' CURL_LDFLAGS='' CXX='' CXXCPP='' CXXDEPMODE='' CXXFLAGS='' CYGPATH_W='echo' DEFS='' DEPDIR='.deps' DLLTOOL='' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='' ENABLE_ALL_STATIC_FALSE='' ENABLE_ALL_STATIC_TRUE='' ENABLE_CDI_LIB='' ENABLE_CDI_LIB_FALSE='' ENABLE_CDI_LIB_TRUE='' ENABLE_CGRIBEX='' ENABLE_DATA='' ENABLE_EXTRA='' ENABLE_GRIB='' ENABLE_GRIBAPI='' ENABLE_IEG='' ENABLE_MAGICS_FALSE='' ENABLE_MAGICS_TRUE='' ENABLE_NC2='' ENABLE_NC4='' ENABLE_NC4HDF5='' ENABLE_NETCDF='' ENABLE_SERVICE='' EXEEXT='' FCFLAGS='' FGREP='' GREP='' GRIB_API_INCLUDE='' GRIB_API_LIBS='' HDF5_INCLUDE='' HDF5_LIBS='' HDF5_ROOT='' HOST_NAME='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LD='' LDFLAGS='-L/data/RHMC/users/models/wrf/WRFV3.7/data/GRIB/GRIB_API/lib/ -L/RHMC/soft/jasper/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/NETCDF/lib -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/libs4cdo-0.0.11/hdf5-1.8.15/lib -L/usr/local/lib -lopenjpeg -L/data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.1rc1/libcdi/lib' LIBOBJS='' LIBS='' LIBTOOL='' LIPO='' LN_S='' LTLIBOBJS='' MAGICS_INCLUDE='' MAGICS_LIBS='' MAGICS_ROOT='' MAINT='#' MAINTAINER_MODE_FALSE='' MAINTAINER_MODE_TRUE='#' MAKEINFO='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/missing makeinfo' MANIFEST_TOOL='' MKDIR_P='/bin/mkdir -p' NC_CONFIG='' NETCDF_INCLUDE='' NETCDF_LIBS='' NETCDF_ROOT='' NM='' NMEDIT='' OBJDUMP='' OBJEXT='' OPENMP_CFLAGS='' OTOOL64='' OTOOL='' PACKAGE='cdo' PACKAGE_BUGREPORT='http://mpimet.mpg.de/cdo' PACKAGE_NAME='cdo' PACKAGE_STRING='cdo 1.7.0' PACKAGE_TARNAME='cdo' PACKAGE_URL='' PACKAGE_VERSION='1.7.0' PATH_SEPARATOR=':' PROJ_INCLUDE='' PROJ_LDFLAGS='' PTHREAD_CC='' PTHREAD_CFLAGS='' PTHREAD_LIBS='' RANLIB='' SED='' SET_MAKE='' SHELL='/bin/sh' STRIP='' SYSTEM_TYPE='' SZLIB_INCLUDE='' SZLIB_LIBS='' THREADS_INCLUDE='' THREADS_LIBS='' UDUNITS_INCLUDE='' UDUNITS_LDFLAGS='' USER_NAME='' VERSION='1.7.0' XML2_LIBS='' ZLIB_INCLUDE='' ZLIB_LIBS='' ac_ct_AR='' ac_ct_CC='gcc' ac_ct_CXX='' ac_ct_DUMPBIN='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='' am__fastdepCC_FALSE='' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='' am__fastdepCXX_TRUE='' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' ax_pthread_config='' bindir='${exec_prefix}/bin' build='x86_64-unknown-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='unknown' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='NONE' host='x86_64-unknown-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='unknown' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /data/RHMC/users/models/wrf/WRFV3.7/data/cdo/cdo-1.7.0/config/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='NONE' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' subdirs='' sysconfdir='${prefix}/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "cdo" #define PACKAGE_TARNAME "cdo" #define PACKAGE_VERSION "1.7.0" #define PACKAGE_STRING "cdo 1.7.0" #define PACKAGE_BUGREPORT "http://mpimet.mpg.de/cdo" #define PACKAGE_URL "" #define CDO "1.7.0" #define PACKAGE "cdo" #define VERSION "1.7.0" configure: exit 77